Paket: r-bioc-cummerbund (2.24.0-2)

[ Quellcode: r-bioc-cummerbund  ]

tool for analysis of Cufflinks RNA-Seq output

Allows for persistent storage, access, exploration, and manipulation of Cufflinks high-throughput sequencing data. In addition, provides numerous plotting functions for commonly used visualizations.

Andere Pakete mit Bezug zu r-bioc-cummerbund

• dep: r-api-3.5

  virtuelles Paket, bereitgestellt durch r-base-core

• dep: r-api-bioc-3.8

  virtuelles Paket, bereitgestellt durch r-bioc-biocgenerics

• dep: r-base-core (>= 3.5.1-2)

  GNU R - System für statistische Berechnungen und Grafik - Kern

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.3.2)

  generic functions for Bioconductor

• dep: r-bioc-gviz

  Plotting data and annotation information along genomic coordinates

• dep: r-bioc-rtracklayer

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.9.25)

  BioConductor S4 implementation of vectors and lists

• dep: r-cran-fastcluster

  Fast hierarchical clustering routines for GNU R

• dep: r-cran-ggplot2

  Implementierung der »Grammar of Graphics«

• dep: r-cran-plyr

  tools for splitting, applying and combining data

• dep: r-cran-reshape2

  Flexibly reshape data: a reboot of the reshape package

• dep: r-cran-rsqlite

  R-Datenbank-Schnittstellentreiber für SQLite

• sug: r-bioc-genomicfeatures

  GNU R tools for making and manipulating transcript centric annotations

• sug: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• sug: r-cran-cluster

  GNU-R-Paket zur Cluster-Analyse von Rousseeuw et al

• sug: r-cran-rjson

  GNU R package for converting between R and JSON objects

• sug: r-cran-stringr

  Erleichtert die Arbeit mit Strings

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Architektur	Paketgröße	Größe (installiert)	Dateien
all	2.480,9 kB	8.929,0 kB	[Liste der Dateien]