Paket: r-bioc-biocneighbors (1.8.2+ds-1)

[ Quellcode: r-bioc-biocneighbors  ]

Nearest Neighbor Detection for Bioconductor Packages

Implements exact and approximate methods for nearest neighbor detection, in a framework that allows them to be easily switched within Bioconductor packages or workflows. Exact searches can be performed using the k-means for k-nearest neighbors algorithm or with vantage point trees. Approximate searches can be performed using the Annoy or HNSW libraries. Searching on either Euclidean or Manhattan distances is supported. Parallelization is achieved for all methods by using BiocParallel. Functions are also provided to search for all neighbors within a given distance.

Andere Pakete mit Bezug zu r-bioc-biocneighbors

• dep: libc6 (>= 2.29)

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

• dep: libgcc-s1 (>= 3.4.4)

  GCC Support-Bibliothek

• dep: libstdc++6 (>= 5.2)

  GNU-Implementierung der Standard-C++-Bibliothek (Version 3)

• dep: r-api-4.0

  virtuelles Paket, bereitgestellt durch r-base-core

• dep: r-api-bioc-3.12

  virtuelles Paket, bereitgestellt durch r-bioc-biocgenerics

• dep: r-base-core (>= 4.0.3-1)

  GNU R - System für statistische Berechnungen und Grafik - Kern

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-cran-matrix

  GNU R - Paket von Klassen für dicht und dünn besetzte Matrizen

• dep: r-cran-rcpp

  GNU-R-Paket für die nahtlose Verflechtung von R und C++

• dep: r-cran-rcpphnsw

  R bindings for a Library for Approximate Nearest Neighbors

• rec: r-cran-fnn

  GNU R fast nearest neighbor search algorithms and applications

• rec: r-cran-testthat

  GNU R testsuite

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rcppannoy

  Rcpp bindings for Annoy (approximate nearest neighbors)

• sug: r-cran-rmarkdown

  Konvertierung von R-Markdown-Dokumenten in verschiedene Formate

r-bioc-biocneighbors herunterladen

Download für alle verfügbaren Architekturen

Architektur	Paketgröße	Größe (installiert)	Dateien
ppc64el	520,2 kB	1.278,0 kB	[Liste der Dateien]