Paket: r-bioc-hdf5array (1.18.1-3)

[ Quellcode: r-bioc-hdf5array  ]

HDF5 backend for DelayedArray objects

Implements the HDF5Array and TENxMatrix classes, 2 convenient and memory-efficient array-like containers for on-disk representation of HDF5 datasets. HDF5Array is for datasets that use the conventional (i.e. dense) HDF5 representation. TENxMatrix is for datasets that use the HDF5-based sparse matrix representation from 10x Genomics (e.g. the 1.3 Million Brain Cell Dataset). Both containers being DelayedArray extensions, they support all operations supported by DelayedArray objects. These operations can be either delayed or block-processed.

Andere Pakete mit Bezug zu r-bioc-hdf5array

• dep: libc6 (>= 2.4)

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

• dep: libhdf5-103-1

  Hierarchisches Datenformat 5 (HDF5) - C-Laufzeitdateien - serielle Version

• dep: libhdf5-hl-100

  Hierarchisches Datenformat 5 (HDF5) - High-Level-Laufzeitdateien - serielle Version

• dep: r-api-4.0

  virtuelles Paket, bereitgestellt durch r-base-core

• dep: r-api-bioc-3.12

  virtuelles Paket, bereitgestellt durch r-bioc-biocgenerics

• dep: r-base-core (>= 4.0.3-1)

  GNU R - System für statistische Berechnungen und Grafik - Kern

• dep: r-bioc-biocgenerics (>= 0.31.5)

  generic functions for Bioconductor

• dep: r-bioc-delayedarray (>= 0.15.16)

  BioConductor delayed operations on array-like objects

• dep: r-bioc-iranges

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rhdf5 (>= 2.31.6)

  BioConductor HDF5 interface to R

• dep: r-bioc-rhdf5lib

  GNU R hdf5 library

• dep: r-bioc-s4vectors (>= 0.27.13)

  BioConductor S4 implementation of vectors and lists

• dep: r-cran-matrix

  GNU R - Paket von Klassen für dicht und dünn besetzte Matrizen

• sug: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-experimenthub

  BioConductor client to access ExperimentHub resources

• sug: r-bioc-genomicfeatures

  GNU R tools for making and manipulating transcript centric annotations

• sug: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• sug: r-bioc-summarizedexperiment (>= 1.15.1)

  BioConductor assay container

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Architektur	Paketgröße	Größe (installiert)	Dateien
armel	8.415,6 kB	8.817,0 kB	[Liste der Dateien]