Paket: r-bioc-metagenomeseq (1.40.0-1)

[ Quellcode: r-bioc-metagenomeseq  ]

GNU R statistical analysis for sparse high-throughput sequencing

MetagenomeSeq is designed to determine features (be it Operational Taxanomic Unit (OTU), species, etc.) that are differentially abundant between two or more groups of multiple samples. metagenomeSeq is designed to address the effects of both normalization and under-sampling of microbial communities on disease association detection and the testing of feature correlations.

Andere Pakete mit Bezug zu r-bioc-metagenomeseq

• dep: r-api-4.0

  virtuelles Paket, bereitgestellt durch r-base-core

• dep: r-api-bioc-3.16

  virtuelles Paket, bereitgestellt durch r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-1)

  GNU R - System für statistische Berechnungen und Grafik - Kern

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-limma

  linear models for microarray data

• dep: r-bioc-wrench

  GNU R wrench normalization for sparse count data

• dep: r-cran-foreach

  GNU R foreach looping support

• dep: r-cran-glmnet

  Lasso and Elastic-Net Regularized Generalized Linear Models

• dep: r-cran-gplots

  GNU R package with tools for plotting data by Greg Warnes et al

• dep: r-cran-matrix

  GNU R - Paket von Klassen für dicht und dünn besetzte Matrizen

• dep: r-cran-matrixstats

  GNU R methods that apply to rows and columns of a matrix

• dep: r-cran-rcolorbrewer

  GNU R package providing suitable color palettes

• sug: r-bioc-annotate

  BioConductor annotation for microarrays

• sug: r-bioc-biocgenerics

  generic functions for Bioconductor

• sug: r-bioc-biomformat

  GNU R interface package for the BIOM file format

• sug: r-bioc-ihw

  GNU R independent hypothesis weighting

• sug: r-cran-gss

  GNU R package for multivariate estimation using smoothing splines

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-testthat (>= 0.8)

  GNU R testsuite

• sug: r-cran-vegan

  Community Ecology Package for R

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