Paket: r-bioc-genomicfiles (1.34.0-1)

[ Quellcode: r-bioc-genomicfiles  ]

Distributed computing by file or by range

This package provides infrastructure for parallel computations distributed 'by file' or 'by range'. User defined MAPPER and REDUCER functions provide added flexibility for data combination and manipulation.

Andere Pakete mit Bezug zu r-bioc-genomicfiles

• dep: r-api-4.0

  virtuelles Paket, bereitgestellt durch r-base-core

• dep: r-api-bioc-3.16

  virtuelles Paket, bereitgestellt durch r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-1)

  GNU R - System für statistische Berechnungen und Grafik - Kern

• dep: r-bioc-biocgenerics (>= 0.11.2)

  generic functions for Bioconductor

• dep: r-bioc-biocparallel (>= 1.1.0)

  BioConductor facilities for parallel evaluation

• dep: r-bioc-genomeinfodb

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicalignments (>= 1.7.7)

  BioConductor representation and manipulation of short genomic alignments

• dep: r-bioc-genomicranges (>= 1.31.16)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-matrixgenerics

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-rsamtools (>= 1.17.29)

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-rtracklayer (>= 1.25.3)

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.9.25)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• dep: r-bioc-variantannotation (>= 1.27.9)

  BioConductor annotation of genetic variants

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-biostrings

  GNU R string objects representing biological sequences

• sug: r-bioc-genefilter

  methods for filtering genes from microarray experiments

• sug: r-bioc-snpstats

  BioConductor SnpMatrix and XSnpMatrix classes and methods

• sug: r-cran-runit

  GNU-R-Paket, das ein Programmiergerüst für Komponententests bereitstellt

r-bioc-genomicfiles herunterladen

Download für alle verfügbaren Architekturen

Architektur	Paketgröße	Größe (installiert)	Dateien
all	891,3 kB	1.196,0 kB	[Liste der Dateien]