Paket: dascrubber (1.1-4)

[ Quellcode: dascrubber  ]

alignment-based scrubbing pipeline for DNA sequencing reads

The Dazzler Scrubbing Suite produces a set of edited reads that are guaranteed to

 * be continuous stretches of the underlying genome (i.e. no unremoved
   adapters and not chimers)
 * have no very low quality stretches (i.e. the error rate never exceeds some
   reasonable maximum, 20% or so in the case of Pacbio data).

Its secondary goal is to do so with the minimum removal of data and splitting of reads.

Andere Pakete mit Bezug zu dascrubber

• dep: libc6 (>= 2.7)

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

• sug: daligner

  local alignment discovery between long nucleotide sequencing reads

• sug: dazzdb

  manage nucleotide sequencing read data

dascrubber herunterladen

Download für alle verfügbaren Architekturen

Architektur	Paketgröße	Größe (installiert)	Dateien
i386	157,6 kB	1.327,0 kB	[Liste der Dateien]