Package: poa (2.0+20060928-7)

[ Source: poa  ]

Partial Order Alignment for multiple sequence alignment

POA is Partial Order Alignment, a fast program for multiple sequence alignment (MSA) in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment. Partial order alignment is an approach to MSA, which can be combined with existing methods such as progressive alignment. POA optimally aligns a pair of MSAs and which therefore can be applied directly to progressive alignment methods such as CLUSTAL. For large alignments, Progressive POA is 10-30 times faster than CLUSTALW.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, works-with-format::plaintext, Works with: Need an extra tag

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• dep: libc6 (>= 2.14) [amd64]

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  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.7) [armhf, i386]

• sug: blast2

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• enh: t-coffee

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Architecture	Package Size	Installed Size	Files
amd64	51.7 kB	140.0 kB	[list of files]
arm64	48.7 kB	131.0 kB	[list of files]
armhf	46.8 kB	107.0 kB	[list of files]
i386	52.4 kB	147.0 kB	[list of files]