Package: probcons (1.12-13)

[ Source: probcons  ]

PROBabilistic CONSistency-based multiple sequence alignment

Tool for generating multiple alignments of protein sequences. Using a combination of probabilistic modeling and consistency-based alignment techniques, PROBCONS has achieved the highest accuracies of all alignment methods to date. On the BAliBASE benchmark alignment database, alignments produced by PROBCONS show statistically significant improvement over current programs, containing an average of 7% more correctly aligned columns than those of T-Coffee, 11% more correctly aligned columns than those of CLUSTAL W, and 14% more correctly aligned columns than those of DIALIGN.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

Other Packages Related to probcons

• dep: libc6 (>= 2.27)

  Knihovna GNU C: Sdílené knihovny
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  Knihovna pro překladač GCC

• dep: libstdc++6 (>= 9)

  GNU Standard C++ Library v3

• sug: probcons-extra

  Extra programy pro balíček probcons

• enh: t-coffee

  Multiple Sequence Alignment

Download probcons

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Architecture	Package Size	Installed Size	Files
ppc64el	135.3 kB	415.0 kB	[list of files]