all options
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Source: boxshade  ]

Package: boxshade (3.3.1-12)

Links for boxshade

Screenshot

Debian Resources:

Download Source Package boxshade:

Maintainers:

External Resources:

Similar packages:

Pretty-printing of multiple sequence alignments

Boxshade is a program for creating good looking printouts from multiple-aligned protein or DNA sequences. The program does not perform the alignment by itself and requires as input a file that was created by a multiple alignment program or manually edited with respective tools.

Boxshade reads multiple-aligned sequences from either PILEUP-MSF, CLUSTAL-ALN, MALIGNED-data and ESEE-save files (limited to a maximum of 150 sequences with up to 10000 elements each). Various kinds of shading can be applied to identical/similar residues. Output is written to screen or to a file in the following formats: ANSI/VT100, PS/EPS, RTF, HPGL, ReGIS, LJ250-printer, ASCII, xFIG, PICT, HTML

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, use::typesetting, Supports Format: works-with-format::html, works-with-format::plaintext, works-with-format::postscript, works-with-format::tex, Works with: Need an extra tag, Text

Other Packages Related to boxshade

  • depends
  • recommends
  • suggests
  • enhances

Download boxshade

Download for all available architectures
Architecture Package Size Installed Size Files
armhf 51.6 kB135.0 kB [list of files]